Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3f3cP02301 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
H3f3cP02301 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
H3f3cP02301 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
H3f3cP02301 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
H3f3cP02301 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
H3f3cP02301 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3f3cP02301 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3cP02301 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3cP02301 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3f3cP02301 Amer2-203ENSMUST00000225247 2662 ntBASIC20.35■□□□□ 0.85
H3f3cP02301 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
H3f3cP02301 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H3f3cP02301 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3f3cP02301 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
H3f3cP02301 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
H3f3cP02301 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3f3cP02301 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3f3cP02301 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3cP02301 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3cP02301 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3f3cP02301 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.32■□□□□ 0.84
H3f3cP02301 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.32■□□□□ 0.84
H3f3cP02301 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.31■□□□□ 0.84
H3f3cP02301 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3f3cP02301 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H3f3cP02301 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3f3cP02301 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3f3cP02301 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.3■□□□□ 0.84
H3f3cP02301 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3f3cP02301 Nkain2-201ENSMUST00000092602 558 ntBASIC20.29■□□□□ 0.84
H3f3cP02301 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3f3cP02301 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.28■□□□□ 0.84
H3f3cP02301 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3f3cP02301 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.28■□□□□ 0.84
H3f3cP02301 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
H3f3cP02301 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3f3cP02301 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
H3f3cP02301 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H3f3cP02301 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H3f3cP02301 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.25■□□□□ 0.83
H3f3cP02301 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
H3f3cP02301 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.25■□□□□ 0.83
H3f3cP02301 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3f3cP02301 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H3f3cP02301 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3f3cP02301 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
H3f3cP02301 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H3f3cP02301 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.22■□□□□ 0.83
H3f3cP02301 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
H3f3cP02301 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3f3cP02301 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H3f3cP02301 Gm8503-201ENSMUST00000118131 455 ntBASIC20.21■□□□□ 0.83
H3f3cP02301 Gm30023-201ENSMUST00000197970 889 ntBASIC20.21■□□□□ 0.83
H3f3cP02301 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3f3cP02301 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H3f3cP02301 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
H3f3cP02301 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H3f3cP02301 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
H3f3cP02301 Gm6821-201ENSMUST00000107540 542 ntBASIC20.19■□□□□ 0.82
H3f3cP02301 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H3f3cP02301 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
H3f3cP02301 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3f3cP02301 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3f3cP02301 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3f3cP02301 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H3f3cP02301 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H3f3cP02301 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.17■□□□□ 0.82
H3f3cP02301 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H3f3cP02301 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H3f3cP02301 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H3f3cP02301 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H3f3cP02301 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H3f3cP02301 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H3f3cP02301 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
H3f3cP02301 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3f3cP02301 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3f3cP02301 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
H3f3cP02301 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
H3f3cP02301 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
H3f3cP02301 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H3f3cP02301 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H3f3cP02301 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3f3cP02301 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3f3cP02301 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H3f3cP02301 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.13■□□□□ 0.81
H3f3cP02301 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H3f3cP02301 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3f3cP02301 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.12■□□□□ 0.81
H3f3cP02301 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.12■□□□□ 0.81
H3f3cP02301 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3f3cP02301 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
H3f3cP02301 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
H3f3cP02301 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H3f3cP02301 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms