Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Mtco1P00397 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Mtco1P00397 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Mtco1P00397 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Mtco1P00397 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Mtco1P00397 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Mtco1P00397 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Mtco1P00397 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.59■■□□□ 1.85
Mtco1P00397 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Mtco1P00397 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Mtco1P00397 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.57■■□□□ 1.84
Mtco1P00397 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Mtco1P00397 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Mtco1P00397 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Mtco1P00397 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Mtco1P00397 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Mtco1P00397 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.54■■□□□ 1.84
Mtco1P00397 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.54■■□□□ 1.84
Mtco1P00397 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Mtco1P00397 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Mtco1P00397 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Mtco1P00397 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.52■■□□□ 1.84
Mtco1P00397 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.51■■□□□ 1.83
Mtco1P00397 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Mtco1P00397 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.5■■□□□ 1.83
Mtco1P00397 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Mtco1P00397 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Mtco1P00397 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Mtco1P00397 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Mtco1P00397 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Mtco1P00397 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Mtco1P00397 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Mtco1P00397 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Mtco1P00397 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Mtco1P00397 Zxda-201ENSMUST00000117281 2621 ntBASIC26.47■■□□□ 1.83
Mtco1P00397 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Mtco1P00397 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
Mtco1P00397 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Mtco1P00397 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Mtco1P00397 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Mtco1P00397 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Mtco1P00397 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.43■■□□□ 1.82
Mtco1P00397 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.43■■□□□ 1.82
Mtco1P00397 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Mtco1P00397 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Mtco1P00397 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Mtco1P00397 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Mtco1P00397 Particl-201ENSMUST00000205370 1560 ntBASIC26.41■■□□□ 1.82
Mtco1P00397 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.4■■□□□ 1.82
Mtco1P00397 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Mtco1P00397 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Mtco1P00397 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Mtco1P00397 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Mtco1P00397 Gm11175-201ENSMUST00000116172 543 ntBASIC26.35■■□□□ 1.81
Mtco1P00397 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Mtco1P00397 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Mtco1P00397 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Mtco1P00397 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Mtco1P00397 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Mtco1P00397 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Mtco1P00397 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Mtco1P00397 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Mtco1P00397 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Mtco1P00397 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Mtco1P00397 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Mtco1P00397 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Mtco1P00397 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Mtco1P00397 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Mtco1P00397 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Mtco1P00397 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.29■■□□□ 1.8
Mtco1P00397 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Mtco1P00397 Gm6311-201ENSMUST00000073790 878 ntBASIC26.29■■□□□ 1.8
Mtco1P00397 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Mtco1P00397 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.28■■□□□ 1.8
Mtco1P00397 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Mtco1P00397 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.27■■□□□ 1.8
Mtco1P00397 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Mtco1P00397 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.27■■□□□ 1.8
Mtco1P00397 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Mtco1P00397 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Mtco1P00397 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Mtco1P00397 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Mtco1P00397 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.24■■□□□ 1.79
Mtco1P00397 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.24■■□□□ 1.79
Mtco1P00397 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Mtco1P00397 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Mtco1P00397 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.22■■□□□ 1.79
Mtco1P00397 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Mtco1P00397 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Mtco1P00397 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Mtco1P00397 Mir6538-201ENSMUST00000183713 110 ntBASIC26.19■■□□□ 1.78
Mtco1P00397 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
Mtco1P00397 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Mtco1P00397 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.18■■□□□ 1.78
Mtco1P00397 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Mtco1P00397 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Mtco1P00397 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Mtco1P00397 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Mtco1P00397 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.16■■□□□ 1.78
Mtco1P00397 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms