Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac3O88895 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac3O88895 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac3O88895 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hdac3O88895 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac3O88895 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac3O88895 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac3O88895 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.13■□□□□ 0.97
Hdac3O88895 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac3O88895 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Hdac3O88895 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.11■□□□□ 0.97
Hdac3O88895 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac3O88895 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac3O88895 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.1■□□□□ 0.97
Hdac3O88895 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac3O88895 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac3O88895 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hdac3O88895 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hdac3O88895 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hdac3O88895 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hdac3O88895 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hdac3O88895 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hdac3O88895 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hdac3O88895 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Hdac3O88895 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hdac3O88895 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hdac3O88895 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hdac3O88895 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hdac3O88895 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Hdac3O88895 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hdac3O88895 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hdac3O88895 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hdac3O88895 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hdac3O88895 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hdac3O88895 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac3O88895 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac3O88895 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hdac3O88895 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac3O88895 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac3O88895 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Hdac3O88895 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hdac3O88895 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.03■□□□□ 0.96
Hdac3O88895 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.03■□□□□ 0.96
Hdac3O88895 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hdac3O88895 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.03■□□□□ 0.96
Hdac3O88895 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hdac3O88895 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.02■□□□□ 0.96
Hdac3O88895 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hdac3O88895 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.01■□□□□ 0.95
Hdac3O88895 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hdac3O88895 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.01■□□□□ 0.95
Hdac3O88895 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac3O88895 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hdac3O88895 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hdac3O88895 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hdac3O88895 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac3O88895 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac3O88895 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac3O88895 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac3O88895 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.98■□□□□ 0.95
Hdac3O88895 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac3O88895 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac3O88895 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hdac3O88895 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac3O88895 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac3O88895 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac3O88895 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac3O88895 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac3O88895 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Hdac3O88895 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac3O88895 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hdac3O88895 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hdac3O88895 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac3O88895 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac3O88895 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac3O88895 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hdac3O88895 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac3O88895 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac3O88895 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac3O88895 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac3O88895 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hdac3O88895 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.89■□□□□ 0.93
Hdac3O88895 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac3O88895 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac3O88895 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac3O88895 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hdac3O88895 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac3O88895 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac3O88895 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac3O88895 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms