Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.01■□□□□ 0.95
Slc28a2O88627 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Slc28a2O88627 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc28a2O88627 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Gm9397-201ENSMUST00000200125 605 ntBASIC20.99■□□□□ 0.95
Slc28a2O88627 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a2O88627 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc28a2O88627 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a2O88627 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a2O88627 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.96■□□□□ 0.95
Slc28a2O88627 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.96■□□□□ 0.95
Slc28a2O88627 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a2O88627 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a2O88627 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc28a2O88627 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc28a2O88627 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc28a2O88627 Gm45855-201ENSMUST00000212546 880 ntBASIC20.93■□□□□ 0.94
Slc28a2O88627 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc28a2O88627 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Slc28a2O88627 Gm24970-201ENSMUST00000175582 82 ntBASIC20.91■□□□□ 0.94
Slc28a2O88627 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.9■□□□□ 0.94
Slc28a2O88627 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Slc28a2O88627 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc28a2O88627 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Slc28a2O88627 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc28a2O88627 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc28a2O88627 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.89■□□□□ 0.93
Slc28a2O88627 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc28a2O88627 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc28a2O88627 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc28a2O88627 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc28a2O88627 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.85■□□□□ 0.93
Slc28a2O88627 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc28a2O88627 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc28a2O88627 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Slc28a2O88627 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Slc28a2O88627 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc28a2O88627 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slc28a2O88627 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc28a2O88627 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc28a2O88627 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc28a2O88627 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc28a2O88627 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc28a2O88627 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.78■□□□□ 0.92
Slc28a2O88627 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Slc28a2O88627 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc28a2O88627 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc28a2O88627 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Slc28a2O88627 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms