Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sigmar1O55242 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sigmar1O55242 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sigmar1O55242 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sigmar1O55242 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sigmar1O55242 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sigmar1O55242 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sigmar1O55242 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sigmar1O55242 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sigmar1O55242 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sigmar1O55242 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sigmar1O55242 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sigmar1O55242 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sigmar1O55242 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sigmar1O55242 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sigmar1O55242 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sigmar1O55242 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sigmar1O55242 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sigmar1O55242 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sigmar1O55242 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sigmar1O55242 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sigmar1O55242 Gm27325-201ENSMUST00000175467 74 ntBASIC16.43■□□□□ 0.22
Sigmar1O55242 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sigmar1O55242 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sigmar1O55242 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sigmar1O55242 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Sigmar1O55242 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sigmar1O55242 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sigmar1O55242 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sigmar1O55242 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sigmar1O55242 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sigmar1O55242 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sigmar1O55242 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sigmar1O55242 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sigmar1O55242 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sigmar1O55242 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.41■□□□□ 0.22
Sigmar1O55242 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sigmar1O55242 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sigmar1O55242 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sigmar1O55242 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sigmar1O55242 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.39■□□□□ 0.21
Sigmar1O55242 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sigmar1O55242 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sigmar1O55242 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sigmar1O55242 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sigmar1O55242 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sigmar1O55242 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.38■□□□□ 0.21
Sigmar1O55242 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sigmar1O55242 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sigmar1O55242 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Sigmar1O55242 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sigmar1O55242 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sigmar1O55242 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sigmar1O55242 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sigmar1O55242 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sigmar1O55242 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.36■□□□□ 0.21
Sigmar1O55242 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sigmar1O55242 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sigmar1O55242 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.36■□□□□ 0.21
Sigmar1O55242 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sigmar1O55242 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sigmar1O55242 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sigmar1O55242 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sigmar1O55242 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Sigmar1O55242 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sigmar1O55242 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sigmar1O55242 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sigmar1O55242 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sigmar1O55242 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.35■□□□□ 0.21
Sigmar1O55242 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sigmar1O55242 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.34■□□□□ 0.21
Sigmar1O55242 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.34■□□□□ 0.21
Sigmar1O55242 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sigmar1O55242 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sigmar1O55242 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sigmar1O55242 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sigmar1O55242 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sigmar1O55242 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sigmar1O55242 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sigmar1O55242 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sigmar1O55242 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sigmar1O55242 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sigmar1O55242 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sigmar1O55242 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC16.31■□□□□ 0.2
Sigmar1O55242 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sigmar1O55242 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.3■□□□□ 0.2
Sigmar1O55242 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sigmar1O55242 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sigmar1O55242 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.3■□□□□ 0.2
Sigmar1O55242 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sigmar1O55242 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sigmar1O55242 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sigmar1O55242 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sigmar1O55242 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sigmar1O55242 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sigmar1O55242 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sigmar1O55242 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sigmar1O55242 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sigmar1O55242 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sigmar1O55242 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms