Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfsf12O54907 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfsf12O54907 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.51■□□□□ 0.71
Tnfsf12O54907 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf12O54907 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfsf12O54907 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfsf12O54907 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfsf12O54907 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfsf12O54907 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tnfsf12O54907 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfsf12O54907 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf12O54907 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.46■□□□□ 0.71
Tnfsf12O54907 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tnfsf12O54907 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfsf12O54907 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tnfsf12O54907 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.45■□□□□ 0.7
Tnfsf12O54907 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf12O54907 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf12O54907 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf12O54907 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf12O54907 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfsf12O54907 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfsf12O54907 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf12O54907 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf12O54907 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf12O54907 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf12O54907 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf12O54907 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfsf12O54907 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf12O54907 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf12O54907 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf12O54907 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf12O54907 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf12O54907 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tnfsf12O54907 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf12O54907 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf12O54907 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.36■□□□□ 0.69
Tnfsf12O54907 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf12O54907 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf12O54907 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf12O54907 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf12O54907 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tnfsf12O54907 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf12O54907 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Tnfsf12O54907 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnfsf12O54907 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfsf12O54907 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfsf12O54907 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf12O54907 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf12O54907 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf12O54907 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf12O54907 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf12O54907 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tnfsf12O54907 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf12O54907 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfsf12O54907 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf12O54907 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf12O54907 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf12O54907 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfsf12O54907 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tnfsf12O54907 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf12O54907 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf12O54907 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tnfsf12O54907 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Tnfsf12O54907 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf12O54907 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf12O54907 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.25■□□□□ 0.67
Tnfsf12O54907 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf12O54907 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tnfsf12O54907 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf12O54907 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.24■□□□□ 0.67
Tnfsf12O54907 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf12O54907 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf12O54907 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf12O54907 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf12O54907 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tnfsf12O54907 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf12O54907 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfsf12O54907 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Tnfsf12O54907 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf12O54907 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf12O54907 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms