Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DffbO54788 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DffbO54788 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.36■□□□□ 0.85
DffbO54788 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DffbO54788 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DffbO54788 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
DffbO54788 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DffbO54788 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DffbO54788 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DffbO54788 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DffbO54788 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DffbO54788 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DffbO54788 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DffbO54788 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DffbO54788 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
DffbO54788 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.28■□□□□ 0.84
DffbO54788 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DffbO54788 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.27■□□□□ 0.84
DffbO54788 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DffbO54788 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DffbO54788 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.24■□□□□ 0.83
DffbO54788 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DffbO54788 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DffbO54788 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DffbO54788 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DffbO54788 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DffbO54788 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DffbO54788 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DffbO54788 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DffbO54788 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DffbO54788 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.2■□□□□ 0.82
DffbO54788 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DffbO54788 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DffbO54788 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DffbO54788 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DffbO54788 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DffbO54788 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DffbO54788 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DffbO54788 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.16■□□□□ 0.82
DffbO54788 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
DffbO54788 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DffbO54788 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DffbO54788 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DffbO54788 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.11■□□□□ 0.81
DffbO54788 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
DffbO54788 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DffbO54788 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DffbO54788 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
DffbO54788 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DffbO54788 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.07■□□□□ 0.8
DffbO54788 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DffbO54788 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DffbO54788 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DffbO54788 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DffbO54788 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.04■□□□□ 0.8
DffbO54788 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms