Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ebf3O08791 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ebf3O08791 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ebf3O08791 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ebf3O08791 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ebf3O08791 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ebf3O08791 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ebf3O08791 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ebf3O08791 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ebf3O08791 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.83■■□□□ 1.57
Ebf3O08791 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ebf3O08791 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ebf3O08791 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ebf3O08791 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ebf3O08791 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ebf3O08791 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.81■■□□□ 1.56
Ebf3O08791 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.8■■□□□ 1.56
Ebf3O08791 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ebf3O08791 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Ebf3O08791 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Ebf3O08791 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ebf3O08791 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ebf3O08791 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ebf3O08791 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.77■■□□□ 1.56
Ebf3O08791 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ebf3O08791 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ebf3O08791 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ebf3O08791 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ebf3O08791 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ebf3O08791 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.75■■□□□ 1.55
Ebf3O08791 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ebf3O08791 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ebf3O08791 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Ebf3O08791 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.73■■□□□ 1.55
Ebf3O08791 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ebf3O08791 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.73■■□□□ 1.55
Ebf3O08791 Gm11175-201ENSMUST00000116172 543 ntBASIC24.72■■□□□ 1.55
Ebf3O08791 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ebf3O08791 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.71■■□□□ 1.55
Ebf3O08791 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ebf3O08791 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Ebf3O08791 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ebf3O08791 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ebf3O08791 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Ebf3O08791 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ebf3O08791 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ebf3O08791 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ebf3O08791 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Gm30023-201ENSMUST00000197970 889 ntBASIC24.67■■□□□ 1.54
Ebf3O08791 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ebf3O08791 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 Mir6538-201ENSMUST00000183713 110 ntBASIC24.66■■□□□ 1.54
Ebf3O08791 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ebf3O08791 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Ebf3O08791 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ebf3O08791 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ebf3O08791 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ebf3O08791 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ebf3O08791 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ebf3O08791 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ebf3O08791 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.62■■□□□ 1.53
Ebf3O08791 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.61■■□□□ 1.53
Ebf3O08791 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ebf3O08791 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ebf3O08791 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Ebf3O08791 Amer2-203ENSMUST00000225247 2662 ntBASIC24.59■■□□□ 1.53
Ebf3O08791 Gm6311-201ENSMUST00000073790 878 ntBASIC24.59■■□□□ 1.53
Ebf3O08791 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Ebf3O08791 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ebf3O08791 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.58■■□□□ 1.53
Ebf3O08791 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.57■■□□□ 1.52
Ebf3O08791 Particl-201ENSMUST00000205370 1560 ntBASIC24.56■■□□□ 1.52
Ebf3O08791 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ebf3O08791 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.56■■□□□ 1.52
Ebf3O08791 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ebf3O08791 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ebf3O08791 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ebf3O08791 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ebf3O08791 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ebf3O08791 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.55■■□□□ 1.52
Ebf3O08791 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ebf3O08791 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ebf3O08791 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Ebf3O08791 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ebf3O08791 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ebf3O08791 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ebf3O08791 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ebf3O08791 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.49■■□□□ 1.51
Ebf3O08791 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ebf3O08791 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ebf3O08791 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms