Protein–RNA interactions for Protein: O08580

Esrra, Steroid hormone receptor ERR1, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EsrraO08580 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EsrraO08580 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EsrraO08580 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
EsrraO08580 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EsrraO08580 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.77■■□□□ 1.4
EsrraO08580 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EsrraO08580 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.76■■□□□ 1.39
EsrraO08580 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EsrraO08580 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EsrraO08580 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EsrraO08580 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
EsrraO08580 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EsrraO08580 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
EsrraO08580 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
EsrraO08580 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EsrraO08580 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.72■■□□□ 1.39
EsrraO08580 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
EsrraO08580 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
EsrraO08580 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
EsrraO08580 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
EsrraO08580 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
EsrraO08580 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
EsrraO08580 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
EsrraO08580 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
EsrraO08580 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
EsrraO08580 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
EsrraO08580 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EsrraO08580 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EsrraO08580 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.69■■□□□ 1.38
EsrraO08580 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
EsrraO08580 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EsrraO08580 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EsrraO08580 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.66■■□□□ 1.38
EsrraO08580 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EsrraO08580 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EsrraO08580 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.64■■□□□ 1.38
EsrraO08580 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EsrraO08580 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EsrraO08580 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
EsrraO08580 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
EsrraO08580 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
EsrraO08580 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
EsrraO08580 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.6■■□□□ 1.37
EsrraO08580 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
EsrraO08580 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
EsrraO08580 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
EsrraO08580 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
EsrraO08580 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
EsrraO08580 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
EsrraO08580 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
EsrraO08580 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EsrraO08580 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EsrraO08580 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
EsrraO08580 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
EsrraO08580 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
EsrraO08580 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
EsrraO08580 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.54■■□□□ 1.36
EsrraO08580 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.54■■□□□ 1.36
EsrraO08580 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
EsrraO08580 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
EsrraO08580 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
EsrraO08580 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
EsrraO08580 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
EsrraO08580 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
EsrraO08580 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.52■■□□□ 1.36
EsrraO08580 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.52■■□□□ 1.36
EsrraO08580 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
EsrraO08580 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
EsrraO08580 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
EsrraO08580 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
EsrraO08580 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
EsrraO08580 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EsrraO08580 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EsrraO08580 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.47■■□□□ 1.35
EsrraO08580 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
EsrraO08580 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EsrraO08580 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
EsrraO08580 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
EsrraO08580 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
EsrraO08580 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
EsrraO08580 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
EsrraO08580 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
EsrraO08580 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
EsrraO08580 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
EsrraO08580 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
EsrraO08580 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
EsrraO08580 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
EsrraO08580 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
EsrraO08580 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
EsrraO08580 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.42■■□□□ 1.34
EsrraO08580 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
EsrraO08580 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
EsrraO08580 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
EsrraO08580 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms