Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.67■■■□□ 2.02
B020004C17RikJ3QP07 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
B020004C17RikJ3QP07 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
B020004C17RikJ3QP07 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
B020004C17RikJ3QP07 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
B020004C17RikJ3QP07 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
B020004C17RikJ3QP07 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
B020004C17RikJ3QP07 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
B020004C17RikJ3QP07 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.64■■■□□ 2.01
B020004C17RikJ3QP07 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
B020004C17RikJ3QP07 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.62■■■□□ 2.01
B020004C17RikJ3QP07 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
B020004C17RikJ3QP07 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
B020004C17RikJ3QP07 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
B020004C17RikJ3QP07 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
B020004C17RikJ3QP07 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
B020004C17RikJ3QP07 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
B020004C17RikJ3QP07 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
B020004C17RikJ3QP07 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.59■■■□□ 2.01
B020004C17RikJ3QP07 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
B020004C17RikJ3QP07 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
B020004C17RikJ3QP07 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
B020004C17RikJ3QP07 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
B020004C17RikJ3QP07 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.57■■■□□ 2
B020004C17RikJ3QP07 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
B020004C17RikJ3QP07 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
B020004C17RikJ3QP07 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
B020004C17RikJ3QP07 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
B020004C17RikJ3QP07 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
B020004C17RikJ3QP07 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
B020004C17RikJ3QP07 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.51■■■□□ 2
B020004C17RikJ3QP07 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.51■■□□□ 1.99
B020004C17RikJ3QP07 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
B020004C17RikJ3QP07 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
B020004C17RikJ3QP07 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
B020004C17RikJ3QP07 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.49■■□□□ 1.99
B020004C17RikJ3QP07 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
B020004C17RikJ3QP07 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.48■■□□□ 1.99
B020004C17RikJ3QP07 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
B020004C17RikJ3QP07 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.47■■□□□ 1.99
B020004C17RikJ3QP07 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
B020004C17RikJ3QP07 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
B020004C17RikJ3QP07 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
B020004C17RikJ3QP07 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
B020004C17RikJ3QP07 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
B020004C17RikJ3QP07 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.45■■□□□ 1.98
B020004C17RikJ3QP07 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
B020004C17RikJ3QP07 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
B020004C17RikJ3QP07 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
B020004C17RikJ3QP07 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.42■■□□□ 1.98
B020004C17RikJ3QP07 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
B020004C17RikJ3QP07 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.41■■□□□ 1.98
B020004C17RikJ3QP07 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
B020004C17RikJ3QP07 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
B020004C17RikJ3QP07 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.4■■□□□ 1.98
B020004C17RikJ3QP07 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.4■■□□□ 1.98
B020004C17RikJ3QP07 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
B020004C17RikJ3QP07 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
B020004C17RikJ3QP07 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
B020004C17RikJ3QP07 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
B020004C17RikJ3QP07 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
B020004C17RikJ3QP07 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
B020004C17RikJ3QP07 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
B020004C17RikJ3QP07 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
B020004C17RikJ3QP07 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
B020004C17RikJ3QP07 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
B020004C17RikJ3QP07 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
B020004C17RikJ3QP07 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.35■■□□□ 1.97
B020004C17RikJ3QP07 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
B020004C17RikJ3QP07 Scarna2-201ENSMUST00000157560 414 ntBASIC27.34■■□□□ 1.97
B020004C17RikJ3QP07 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
B020004C17RikJ3QP07 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
B020004C17RikJ3QP07 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
B020004C17RikJ3QP07 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
B020004C17RikJ3QP07 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
B020004C17RikJ3QP07 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.31■■□□□ 1.96
B020004C17RikJ3QP07 Gm9806-201ENSMUST00000051080 552 ntBASIC27.31■■□□□ 1.96
B020004C17RikJ3QP07 Gm11687-201ENSMUST00000118911 886 ntBASIC27.29■■□□□ 1.96
B020004C17RikJ3QP07 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
B020004C17RikJ3QP07 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
B020004C17RikJ3QP07 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
B020004C17RikJ3QP07 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
B020004C17RikJ3QP07 Gm4799-201ENSMUST00000095396 657 ntBASIC27.28■■□□□ 1.96
B020004C17RikJ3QP07 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.26■■□□□ 1.95
B020004C17RikJ3QP07 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.26■■□□□ 1.95
B020004C17RikJ3QP07 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.26■■□□□ 1.95
B020004C17RikJ3QP07 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.25■■□□□ 1.95
B020004C17RikJ3QP07 Gm12366-201ENSMUST00000121722 873 ntBASIC27.25■■□□□ 1.95
B020004C17RikJ3QP07 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.25■■□□□ 1.95
B020004C17RikJ3QP07 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.25■■□□□ 1.95
B020004C17RikJ3QP07 Gm5786-201ENSMUST00000085368 882 ntBASIC27.25■■□□□ 1.95
B020004C17RikJ3QP07 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
B020004C17RikJ3QP07 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
B020004C17RikJ3QP07 Mir3960-201ENSMUST00000198213 73 ntBASIC27.23■■□□□ 1.95
B020004C17RikJ3QP07 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms