Protein–RNA interactions for Protein: J3KML6

Gm20830, Predicted gene, 20830, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20830J3KML6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20830J3KML6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20830J3KML6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm20830J3KML6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.44■□□□□ 0.7
Gm20830J3KML6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm20830J3KML6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm20830J3KML6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Gm20830J3KML6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Gm20830J3KML6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm20830J3KML6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm20830J3KML6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20830J3KML6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20830J3KML6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20830J3KML6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20830J3KML6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm20830J3KML6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm20830J3KML6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm20830J3KML6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm20830J3KML6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm20830J3KML6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm20830J3KML6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20830J3KML6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20830J3KML6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm20830J3KML6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.36■□□□□ 0.69
Gm20830J3KML6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm20830J3KML6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm20830J3KML6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20830J3KML6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20830J3KML6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm20830J3KML6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm20830J3KML6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm20830J3KML6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20830J3KML6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20830J3KML6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20830J3KML6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20830J3KML6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm20830J3KML6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm20830J3KML6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm20830J3KML6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm20830J3KML6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20830J3KML6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20830J3KML6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm20830J3KML6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm20830J3KML6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20830J3KML6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20830J3KML6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Gm20830J3KML6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20830J3KML6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20830J3KML6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm20830J3KML6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Gm20830J3KML6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm20830J3KML6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gm20830J3KML6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gm20830J3KML6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm20830J3KML6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm20830J3KML6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm20830J3KML6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm20830J3KML6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm20830J3KML6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm20830J3KML6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm20830J3KML6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Gm20830J3KML6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm20830J3KML6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20830J3KML6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20830J3KML6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm20830J3KML6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm20830J3KML6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.22■□□□□ 0.67
Gm20830J3KML6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm20830J3KML6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm20830J3KML6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.21■□□□□ 0.67
Gm20830J3KML6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm20830J3KML6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm20830J3KML6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm20830J3KML6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.2■□□□□ 0.66
Gm20830J3KML6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.2■□□□□ 0.66
Gm20830J3KML6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm20830J3KML6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm20830J3KML6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm20830J3KML6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm20830J3KML6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm20830J3KML6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm20830J3KML6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm20830J3KML6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm20830J3KML6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Gm20830J3KML6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Gm20830J3KML6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.17■□□□□ 0.66
Gm20830J3KML6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm20830J3KML6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.16■□□□□ 0.66
Gm20830J3KML6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm20830J3KML6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm20830J3KML6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gm20830J3KML6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Gm20830J3KML6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm20830J3KML6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm20830J3KML6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms