Protein–RNA interactions for Protein: F6R5P4

Ccl17, C-C motif chemokine, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl17F6R5P4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl17F6R5P4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccl17F6R5P4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ccl17F6R5P4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccl17F6R5P4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl17F6R5P4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccl17F6R5P4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl17F6R5P4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl17F6R5P4 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.63■□□□□ 0.41
Ccl17F6R5P4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccl17F6R5P4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl17F6R5P4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl17F6R5P4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl17F6R5P4 Notumos-201ENSMUST00000151998 2659 ntBASIC17.61■□□□□ 0.41
Ccl17F6R5P4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl17F6R5P4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl17F6R5P4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl17F6R5P4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl17F6R5P4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl17F6R5P4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl17F6R5P4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl17F6R5P4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl17F6R5P4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.58■□□□□ 0.4
Ccl17F6R5P4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Ccl17F6R5P4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl17F6R5P4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl17F6R5P4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl17F6R5P4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl17F6R5P4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ccl17F6R5P4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl17F6R5P4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl17F6R5P4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccl17F6R5P4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl17F6R5P4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccl17F6R5P4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccl17F6R5P4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl17F6R5P4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl17F6R5P4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl17F6R5P4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl17F6R5P4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccl17F6R5P4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl17F6R5P4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl17F6R5P4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl17F6R5P4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl17F6R5P4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl17F6R5P4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ccl17F6R5P4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ccl17F6R5P4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl17F6R5P4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl17F6R5P4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl17F6R5P4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl17F6R5P4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl17F6R5P4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl17F6R5P4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccl17F6R5P4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl17F6R5P4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl17F6R5P4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccl17F6R5P4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccl17F6R5P4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccl17F6R5P4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl17F6R5P4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl17F6R5P4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccl17F6R5P4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl17F6R5P4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl17F6R5P4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms