Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm12887B1AVM1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12887B1AVM1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12887B1AVM1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12887B1AVM1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.26■□□□□ 0.67
Gm12887B1AVM1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.26■□□□□ 0.67
Gm12887B1AVM1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm12887B1AVM1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm12887B1AVM1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm12887B1AVM1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm12887B1AVM1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gm12887B1AVM1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12887B1AVM1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12887B1AVM1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12887B1AVM1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm12887B1AVM1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm12887B1AVM1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12887B1AVM1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12887B1AVM1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12887B1AVM1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm12887B1AVM1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12887B1AVM1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12887B1AVM1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.2■□□□□ 0.66
Gm12887B1AVM1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm12887B1AVM1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm12887B1AVM1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm12887B1AVM1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm12887B1AVM1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm12887B1AVM1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm12887B1AVM1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm12887B1AVM1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm12887B1AVM1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm12887B1AVM1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm12887B1AVM1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm12887B1AVM1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm12887B1AVM1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm12887B1AVM1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm12887B1AVM1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm12887B1AVM1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm12887B1AVM1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm12887B1AVM1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm12887B1AVM1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm12887B1AVM1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Gm12887B1AVM1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm12887B1AVM1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm12887B1AVM1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Gm12887B1AVM1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm12887B1AVM1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm12887B1AVM1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm12887B1AVM1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm12887B1AVM1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm12887B1AVM1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gm12887B1AVM1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm12887B1AVM1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gm12887B1AVM1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm12887B1AVM1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.12■□□□□ 0.65
Gm12887B1AVM1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gm12887B1AVM1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm12887B1AVM1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm12887B1AVM1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12887B1AVM1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12887B1AVM1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm12887B1AVM1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.09■□□□□ 0.65
Gm12887B1AVM1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm12887B1AVM1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm12887B1AVM1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm12887B1AVM1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm12887B1AVM1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12887B1AVM1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12887B1AVM1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12887B1AVM1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12887B1AVM1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm12887B1AVM1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12887B1AVM1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm12887B1AVM1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12887B1AVM1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm12887B1AVM1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Gm12887B1AVM1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Gm12887B1AVM1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm12887B1AVM1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.02■□□□□ 0.64
Gm12887B1AVM1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gm12887B1AVM1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12887B1AVM1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12887B1AVM1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm12887B1AVM1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms