Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm11127A7VMS2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm11127A7VMS2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm11127A7VMS2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm11127A7VMS2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Gm11127A7VMS2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm11127A7VMS2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm11127A7VMS2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Gm11127A7VMS2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm11127A7VMS2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Gm11127A7VMS2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm11127A7VMS2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm11127A7VMS2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm11127A7VMS2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Gm11127A7VMS2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm11127A7VMS2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm11127A7VMS2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Gm11127A7VMS2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm11127A7VMS2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm11127A7VMS2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm11127A7VMS2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm11127A7VMS2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm11127A7VMS2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm11127A7VMS2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.84■□□□□ 0.93
Gm11127A7VMS2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm11127A7VMS2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm11127A7VMS2 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.83■□□□□ 0.93
Gm11127A7VMS2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm11127A7VMS2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm11127A7VMS2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm11127A7VMS2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm11127A7VMS2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm11127A7VMS2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11127A7VMS2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11127A7VMS2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm11127A7VMS2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm11127A7VMS2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm11127A7VMS2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11127A7VMS2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm11127A7VMS2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm11127A7VMS2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gm11127A7VMS2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gm11127A7VMS2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Gm11127A7VMS2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gm11127A7VMS2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11127A7VMS2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11127A7VMS2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11127A7VMS2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm11127A7VMS2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Gm11127A7VMS2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm11127A7VMS2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm11127A7VMS2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm11127A7VMS2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.76■□□□□ 0.91
Gm11127A7VMS2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm11127A7VMS2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11127A7VMS2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11127A7VMS2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11127A7VMS2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.75■□□□□ 0.91
Gm11127A7VMS2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm11127A7VMS2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11127A7VMS2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11127A7VMS2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11127A7VMS2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm11127A7VMS2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm11127A7VMS2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm11127A7VMS2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.71■□□□□ 0.91
Gm11127A7VMS2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm11127A7VMS2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm11127A7VMS2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Gm11127A7VMS2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm11127A7VMS2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm11127A7VMS2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm11127A7VMS2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm11127A7VMS2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm11127A7VMS2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm11127A7VMS2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm11127A7VMS2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm11127A7VMS2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm11127A7VMS2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm11127A7VMS2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm11127A7VMS2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms