Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC053393A0A0B4J1F6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC053393A0A0B4J1F6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BC053393A0A0B4J1F6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC053393A0A0B4J1F6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
BC053393A0A0B4J1F6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC053393A0A0B4J1F6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BC053393A0A0B4J1F6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BC053393A0A0B4J1F6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BC053393A0A0B4J1F6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC053393A0A0B4J1F6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BC053393A0A0B4J1F6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC053393A0A0B4J1F6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC053393A0A0B4J1F6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BC053393A0A0B4J1F6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.92■□□□□ 0.62
BC053393A0A0B4J1F6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BC053393A0A0B4J1F6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BC053393A0A0B4J1F6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BC053393A0A0B4J1F6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BC053393A0A0B4J1F6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BC053393A0A0B4J1F6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BC053393A0A0B4J1F6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BC053393A0A0B4J1F6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BC053393A0A0B4J1F6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC053393A0A0B4J1F6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC053393A0A0B4J1F6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BC053393A0A0B4J1F6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BC053393A0A0B4J1F6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.89■□□□□ 0.61
BC053393A0A0B4J1F6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BC053393A0A0B4J1F6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BC053393A0A0B4J1F6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BC053393A0A0B4J1F6 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.88■□□□□ 0.61
BC053393A0A0B4J1F6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BC053393A0A0B4J1F6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BC053393A0A0B4J1F6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BC053393A0A0B4J1F6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
BC053393A0A0B4J1F6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BC053393A0A0B4J1F6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BC053393A0A0B4J1F6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BC053393A0A0B4J1F6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BC053393A0A0B4J1F6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BC053393A0A0B4J1F6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BC053393A0A0B4J1F6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BC053393A0A0B4J1F6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BC053393A0A0B4J1F6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BC053393A0A0B4J1F6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BC053393A0A0B4J1F6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
BC053393A0A0B4J1F6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BC053393A0A0B4J1F6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BC053393A0A0B4J1F6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BC053393A0A0B4J1F6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BC053393A0A0B4J1F6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BC053393A0A0B4J1F6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.81■□□□□ 0.6
BC053393A0A0B4J1F6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BC053393A0A0B4J1F6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BC053393A0A0B4J1F6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BC053393A0A0B4J1F6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BC053393A0A0B4J1F6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BC053393A0A0B4J1F6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BC053393A0A0B4J1F6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BC053393A0A0B4J1F6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BC053393A0A0B4J1F6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BC053393A0A0B4J1F6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.78■□□□□ 0.6
BC053393A0A0B4J1F6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BC053393A0A0B4J1F6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BC053393A0A0B4J1F6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BC053393A0A0B4J1F6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BC053393A0A0B4J1F6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
BC053393A0A0B4J1F6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BC053393A0A0B4J1F6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BC053393A0A0B4J1F6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.75■□□□□ 0.59
BC053393A0A0B4J1F6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BC053393A0A0B4J1F6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BC053393A0A0B4J1F6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BC053393A0A0B4J1F6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BC053393A0A0B4J1F6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BC053393A0A0B4J1F6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BC053393A0A0B4J1F6 Zfp131-205ENSMUST00000223812 663 ntBASIC18.72■□□□□ 0.59
BC053393A0A0B4J1F6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BC053393A0A0B4J1F6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BC053393A0A0B4J1F6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BC053393A0A0B4J1F6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BC053393A0A0B4J1F6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms