Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-4A0A075B6C1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav7-4A0A075B6C1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav7-4A0A075B6C1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-4A0A075B6C1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7-4A0A075B6C1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-4A0A075B6C1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-4A0A075B6C1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav7-4A0A075B6C1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7-4A0A075B6C1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav7-4A0A075B6C1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-4A0A075B6C1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trav7-4A0A075B6C1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav7-4A0A075B6C1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-4A0A075B6C1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-4A0A075B6C1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-4A0A075B6C1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-4A0A075B6C1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav7-4A0A075B6C1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7-4A0A075B6C1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav7-4A0A075B6C1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7-4A0A075B6C1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-4A0A075B6C1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-4A0A075B6C1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-4A0A075B6C1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-4A0A075B6C1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-4A0A075B6C1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-4A0A075B6C1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-4A0A075B6C1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-4A0A075B6C1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav7-4A0A075B6C1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-4A0A075B6C1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav7-4A0A075B6C1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-4A0A075B6C1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav7-4A0A075B6C1 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.08■□□□□ 0.48
Trav7-4A0A075B6C1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-4A0A075B6C1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trav7-4A0A075B6C1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-4A0A075B6C1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav7-4A0A075B6C1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-4A0A075B6C1 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.06■□□□□ 0.48
Trav7-4A0A075B6C1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-4A0A075B6C1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-4A0A075B6C1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav7-4A0A075B6C1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trav7-4A0A075B6C1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-4A0A075B6C1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-4A0A075B6C1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-4A0A075B6C1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-4A0A075B6C1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-4A0A075B6C1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav7-4A0A075B6C1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-4A0A075B6C1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-4A0A075B6C1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trav7-4A0A075B6C1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav7-4A0A075B6C1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-4A0A075B6C1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-4A0A075B6C1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7-4A0A075B6C1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-4A0A075B6C1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav7-4A0A075B6C1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-4A0A075B6C1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-4A0A075B6C1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav7-4A0A075B6C1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav7-4A0A075B6C1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Trav7-4A0A075B6C1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-4A0A075B6C1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-4A0A075B6C1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav7-4A0A075B6C1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-4A0A075B6C1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-4A0A075B6C1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-4A0A075B6C1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-4A0A075B6C1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms