Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6n-6A0A075B6B2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6n-6A0A075B6B2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6n-6A0A075B6B2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6n-6A0A075B6B2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.55■□□□□ 0.4
Trav6n-6A0A075B6B2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6n-6A0A075B6B2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.53■□□□□ 0.4
Trav6n-6A0A075B6B2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.53■□□□□ 0.4
Trav6n-6A0A075B6B2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6n-6A0A075B6B2 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.53■□□□□ 0.4
Trav6n-6A0A075B6B2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6n-6A0A075B6B2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6n-6A0A075B6B2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6n-6A0A075B6B2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav6n-6A0A075B6B2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6n-6A0A075B6B2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav6n-6A0A075B6B2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6n-6A0A075B6B2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-6A0A075B6B2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav6n-6A0A075B6B2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-6A0A075B6B2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6n-6A0A075B6B2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav6n-6A0A075B6B2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-6A0A075B6B2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6n-6A0A075B6B2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav6n-6A0A075B6B2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6n-6A0A075B6B2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-6A0A075B6B2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav6n-6A0A075B6B2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-6A0A075B6B2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-6A0A075B6B2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6n-6A0A075B6B2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav6n-6A0A075B6B2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-6A0A075B6B2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-6A0A075B6B2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6n-6A0A075B6B2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6n-6A0A075B6B2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6n-6A0A075B6B2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Trav6n-6A0A075B6B2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6n-6A0A075B6B2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav6n-6A0A075B6B2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-6A0A075B6B2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-6A0A075B6B2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-6A0A075B6B2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-6A0A075B6B2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6n-6A0A075B6B2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6n-6A0A075B6B2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-6A0A075B6B2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-6A0A075B6B2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6n-6A0A075B6B2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6n-6A0A075B6B2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-6A0A075B6B2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav6n-6A0A075B6B2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6n-6A0A075B6B2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav6n-6A0A075B6B2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-6A0A075B6B2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-6A0A075B6B2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Trav6n-6A0A075B6B2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6n-6A0A075B6B2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav6n-6A0A075B6B2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6n-6A0A075B6B2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6n-6A0A075B6B2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.39■□□□□ 0.37
Trav6n-6A0A075B6B2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-6A0A075B6B2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-6A0A075B6B2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6n-6A0A075B6B2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-6A0A075B6B2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.36■□□□□ 0.37
Trav6n-6A0A075B6B2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-6A0A075B6B2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav6n-6A0A075B6B2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms