Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav16nA0A075B634 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav16nA0A075B634 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav16nA0A075B634 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav16nA0A075B634 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav16nA0A075B634 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav16nA0A075B634 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.92■□□□□ 0.46
Trav16nA0A075B634 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav16nA0A075B634 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav16nA0A075B634 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav16nA0A075B634 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16nA0A075B634 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav16nA0A075B634 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav16nA0A075B634 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16nA0A075B634 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav16nA0A075B634 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav16nA0A075B634 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav16nA0A075B634 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16nA0A075B634 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16nA0A075B634 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16nA0A075B634 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16nA0A075B634 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav16nA0A075B634 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav16nA0A075B634 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav16nA0A075B634 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav16nA0A075B634 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav16nA0A075B634 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav16nA0A075B634 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav16nA0A075B634 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16nA0A075B634 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16nA0A075B634 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16nA0A075B634 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16nA0A075B634 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16nA0A075B634 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.79■□□□□ 0.44
Trav16nA0A075B634 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16nA0A075B634 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16nA0A075B634 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16nA0A075B634 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16nA0A075B634 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav16nA0A075B634 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav16nA0A075B634 Gm26115-201ENSMUST00000175605 87 ntBASIC17.77■□□□□ 0.44
Trav16nA0A075B634 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav16nA0A075B634 Gm8109-201ENSMUST00000194076 746 ntBASIC17.76■□□□□ 0.43
Trav16nA0A075B634 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16nA0A075B634 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav16nA0A075B634 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav16nA0A075B634 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16nA0A075B634 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16nA0A075B634 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16nA0A075B634 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16nA0A075B634 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16nA0A075B634 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Trav16nA0A075B634 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16nA0A075B634 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16nA0A075B634 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16nA0A075B634 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav16nA0A075B634 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trav16nA0A075B634 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16nA0A075B634 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms