Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4d-3A0A075B625 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trav4d-3A0A075B625 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4d-3A0A075B625 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav4d-3A0A075B625 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4d-3A0A075B625 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4d-3A0A075B625 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4d-3A0A075B625 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4d-3A0A075B625 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4d-3A0A075B625 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.18■□□□□ 0.18
Trav4d-3A0A075B625 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav4d-3A0A075B625 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4d-3A0A075B625 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4d-3A0A075B625 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4d-3A0A075B625 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4d-3A0A075B625 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4d-3A0A075B625 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav4d-3A0A075B625 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trav4d-3A0A075B625 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav4d-3A0A075B625 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4d-3A0A075B625 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav4d-3A0A075B625 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4d-3A0A075B625 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4d-3A0A075B625 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4d-3A0A075B625 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4d-3A0A075B625 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4d-3A0A075B625 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4d-3A0A075B625 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4d-3A0A075B625 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4d-3A0A075B625 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4d-3A0A075B625 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4d-3A0A075B625 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4d-3A0A075B625 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4d-3A0A075B625 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4d-3A0A075B625 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4d-3A0A075B625 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav4d-3A0A075B625 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav4d-3A0A075B625 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4d-3A0A075B625 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav4d-3A0A075B625 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4d-3A0A075B625 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4d-3A0A075B625 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4d-3A0A075B625 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4d-3A0A075B625 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4d-3A0A075B625 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4d-3A0A075B625 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4d-3A0A075B625 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4d-3A0A075B625 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4d-3A0A075B625 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4d-3A0A075B625 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms