Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4n-4A0A075B615 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trav4n-4A0A075B615 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav4n-4A0A075B615 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4n-4A0A075B615 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4n-4A0A075B615 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4n-4A0A075B615 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4n-4A0A075B615 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4n-4A0A075B615 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4n-4A0A075B615 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4n-4A0A075B615 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav4n-4A0A075B615 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav4n-4A0A075B615 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4n-4A0A075B615 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4n-4A0A075B615 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4n-4A0A075B615 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4n-4A0A075B615 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav4n-4A0A075B615 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4n-4A0A075B615 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4n-4A0A075B615 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4n-4A0A075B615 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Trav4n-4A0A075B615 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4n-4A0A075B615 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4n-4A0A075B615 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4n-4A0A075B615 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4n-4A0A075B615 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4n-4A0A075B615 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4n-4A0A075B615 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav4n-4A0A075B615 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4n-4A0A075B615 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav4n-4A0A075B615 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4n-4A0A075B615 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.5■□□□□ 0.23
Trav4n-4A0A075B615 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4n-4A0A075B615 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav4n-4A0A075B615 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4n-4A0A075B615 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4n-4A0A075B615 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4n-4A0A075B615 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav4n-4A0A075B615 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav4n-4A0A075B615 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4n-4A0A075B615 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav4n-4A0A075B615 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4n-4A0A075B615 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav4n-4A0A075B615 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4n-4A0A075B615 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4n-4A0A075B615 Rab21-202ENSMUST00000218831 843 ntBASIC16.45■□□□□ 0.22
Trav4n-4A0A075B615 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4n-4A0A075B615 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4n-4A0A075B615 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4n-4A0A075B615 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4n-4A0A075B615 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4n-4A0A075B615 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4n-4A0A075B615 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4n-4A0A075B615 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trav4n-4A0A075B615 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4n-4A0A075B615 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4n-4A0A075B615 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4n-4A0A075B615 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4n-4A0A075B615 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav4n-4A0A075B615 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Gm25238-201ENSMUST00000174914 89 ntBASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4n-4A0A075B615 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav4n-4A0A075B615 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4n-4A0A075B615 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms