Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.89□□□□□ -1.47
AP3S2P59780 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 AC007485.2-201ENST00000623493 1667 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC140479.2-201ENST00000421567 3130 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 AC005261.2-201ENST00000593427 4258 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 OR2A3P-202ENST00000641249 1776 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 RN7SKP118-201ENST00000364331 330 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 GAPDHP55-201ENST00000423136 803 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.89□□□□□ -1.47
AP3S2P59780 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC5.89□□□□□ -1.47
AP3S2P59780 KIF3AP1-201ENST00000454055 611 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC009108.1-201ENST00000473913 796 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 RN7SL563P-201ENST00000481233 298 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.89□□□□□ -1.47
AP3S2P59780 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.89□□□□□ -1.47
AP3S2P59780 AP003080.1-202ENST00000526526 915 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 EGLN3P1-201ENST00000541727 720 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
AP3S2P59780 RBM22P13-201ENST00000569805 1244 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.89□□□□□ -1.47
AP3S2P59780 SCML2P1-201ENST00000584511 1100 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.89□□□□□ -1.47
AP3S2P59780 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.89□□□□□ -1.47
AP3S2P59780 FXYD6P1-201ENST00000604857 285 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.89□□□□□ -1.47
AP3S2P59780 AL137246.2-201ENST00000613439 662 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC068234.2-201ENST00000619646 522 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
AP3S2P59780 AP000590.1-201ENST00000624943 464 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC5.89□□□□□ -1.47
AP3S2P59780 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.89□□□□□ -1.47
AP3S2P59780 AC074198.1-201ENST00000506546 1397 ntBASIC5.89□□□□□ -1.47
AP3S2P59780 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.89□□□□□ -1.47
AP3S2P59780 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 AL121839.2-201ENST00000565058 6943 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 RNA5SP514-201ENST00000363717 111 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 AC121334.1-201ENST00000396414 802 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 VN1R13P-201ENST00000406212 885 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 OR2W4P-201ENST00000406496 926 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SKP254-201ENST00000410685 310 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.88□□□□□ -1.47
AP3S2P59780 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.88□□□□□ -1.47
AP3S2P59780 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.88□□□□□ -1.47
AP3S2P59780 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.88□□□□□ -1.47
AP3S2P59780 SNORA81.1-201ENST00000458922 177 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SL392P-201ENST00000473024 299 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SL382P-201ENST00000482631 282 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SL434P-201ENST00000495872 271 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SL792P-201ENST00000496286 305 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 MRPL57P6-201ENST00000506570 309 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RN7SKP52-201ENST00000516219 250 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 ACTG1P15-201ENST00000570019 1063 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 RPS7P1-201ENST00000571702 585 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 LINC00674-202ENST00000590734 160 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC5.88□□□□□ -1.47
AP3S2P59780 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 AC021422.1-201ENST00000621212 473 ntBASIC5.88□□□□□ -1.47
AP3S2P59780 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.88□□□□□ -1.47
AP3S2P59780 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AP3S2P59780 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.88□□□□□ -1.47
AP3S2P59780 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
AP3S2P59780 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
AP3S2P59780 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms