Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC025252.2-201ENST00000537470 502 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AP002383.5-201ENST00000542623 1161 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 LRRC34P1-201ENST00000542742 915 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.36□□□□□ -1.23
COL6A2P12110 RN7SL376P-201ENST00000578594 264 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC137695.2-201ENST00000603123 754 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.36□□□□□ -1.23
COL6A2P12110 OR7M1P-201ENST00000608946 533 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AC087683.2-201ENST00000611384 326 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 AC084824.4-201ENST00000620106 731 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 AC095038.2-201ENST00000621464 1070 ntBASIC7.36□□□□□ -1.23
COL6A2P12110 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.36□□□□□ -1.23
COL6A2P12110 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL6A2P12110 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.36□□□□□ -1.23
COL6A2P12110 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL6A2P12110 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 RNU6-650P-201ENST00000365658 111 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 RBBP4P4-201ENST00000398588 1289 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 AC244505.2-201ENST00000435089 759 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 MTND2P8-201ENST00000450555 1025 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL590648.1-201ENST00000456479 460 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC026336.1-201ENST00000466577 351 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC021074.2-201ENST00000468434 172 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC109454.1-201ENST00000471205 498 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC066616.1-201ENST00000486795 413 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 PRELID3BP6-201ENST00000503839 571 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 AC095059.2-201ENST00000510601 933 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC134698.1-201ENST00000511619 643 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 SOX5P1-201ENST00000524155 1127 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 OR7E87P-201ENST00000532397 929 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 MTND3P12-201ENST00000559068 328 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 MIR3187-201ENST00000583431 70 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 AC103724.4-201ENST00000605981 292 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AL512413.1-201ENST00000606489 382 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AL121652.1-201ENST00000608851 448 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL022238.3-201ENST00000609279 443 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 AC239600.2-201ENST00000619615 1165 ntBASIC7.35□□□□□ -1.23
COL6A2P12110 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.35□□□□□ -1.23
COL6A2P12110 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL6A2P12110 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
COL6A2P12110 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms