Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 OR7E94P-202ENST00000601375 790 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC023513.1-201ENST00000604396 691 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC111186.1-201ENST00000604684 130 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC006335.3-201ENST00000613408 292 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC243830.2-201ENST00000618067 630 ntBASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCNB1IP1Q9NPC3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RBMX2P2-201ENST00000257020 946 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RNA5SP301-201ENST00000362537 121 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SKP63-201ENST00000363187 301 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 Y_RNA.209-201ENST00000364156 111 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OR7E91P-201ENST00000400027 866 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SKP131-201ENST00000410698 301 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RPSAP60-201ENST00000415403 880 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 PPIAP30-201ENST00000415473 519 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 MTND6P1-201ENST00000417434 424 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 CDC42P2-201ENST00000448566 569 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AL591379.2-201ENST00000450223 397 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC114755.1-201ENST00000453101 868 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 TCEAL4P1-201ENST00000453620 588 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC117395.2-201ENST00000463122 1128 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL251P-201ENST00000464175 297 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL259P-201ENST00000478499 253 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AP005202.1-201ENST00000489915 867 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC097263.1-201ENST00000496795 606 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC006070.1-201ENST00000508151 193 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC092375.1-201ENST00000550410 637 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 GTF2IP6-201ENST00000583143 541 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL25P-201ENST00000583862 260 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC087575.1-201ENST00000585087 229 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 NDUFA3P1-201ENST00000588007 252 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 RPS28P1-201ENST00000604589 187 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC016590.3-201ENST00000611171 753 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AC135050.6-202ENST00000613584 392 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCNB1IP1Q9NPC3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC122713.2-201ENST00000624942 3335 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms