Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm45380-201ENSMUST00000210465 315 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Mecom-201ENSMUST00000061088 348 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm23095-201ENSMUST00000083446 107 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm37964-201ENSMUST00000192459 4905 ntBASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Trim41Q5NCC3 Gm43826-201ENSMUST00000199604 2612 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Gm22849-201ENSMUST00000157713 307 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Gm23197-201ENSMUST00000158809 112 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 AC156559.1-201ENSMUST00000224158 222 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Gm26456-201ENSMUST00000082831 111 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Gm14421-201ENSMUST00000121755 1958 ntBASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim41Q5NCC3 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm43426-201ENSMUST00000197287 2597 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm23175-201ENSMUST00000104371 132 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm6574-201ENSMUST00000120037 362 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm26149-201ENSMUST00000157432 108 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm25907-201ENSMUST00000158486 125 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm18453-201ENSMUST00000208000 626 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm5899-201ENSMUST00000071770 270 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm45324-201ENSMUST00000211193 5638 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Gm43363-201ENSMUST00000201590 2647 ntBASIC8.67□□□□□ -1.02
Trim41Q5NCC3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm13903-201ENSMUST00000120945 193 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm14846-201ENSMUST00000121868 216 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm13424-201ENSMUST00000122301 354 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm10042-201ENSMUST00000079884 78 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm23041-201ENSMUST00000083868 106 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm38067-201ENSMUST00000192346 1911 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm14886-201ENSMUST00000117208 2629 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Gm37268-201ENSMUST00000192254 2614 ntBASIC8.66□□□□□ -1.02
Trim41Q5NCC3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm23990-201ENSMUST00000117031 117 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm12112-201ENSMUST00000117772 231 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm14868-201ENSMUST00000117840 216 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm11623-201ENSMUST00000120176 1225 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm11398-201ENSMUST00000120330 320 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm8880-201ENSMUST00000121800 454 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm22026-201ENSMUST00000122735 281 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm24965-201ENSMUST00000157922 106 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 AC124729.1-201ENSMUST00000225327 976 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Gm37485-201ENSMUST00000192326 2953 ntBASIC8.65□□□□□ -1.02
Trim41Q5NCC3 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC8.65□□□□□ -1.03
Trim41Q5NCC3 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim41Q5NCC3 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC8.65□□□□□ -1.03
Trim41Q5NCC3 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Trim41Q5NCC3 AC139218.1-201ENSMUST00000228215 4287 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms