Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 PPIAP30-201ENST00000415473 519 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 GEMIN2P2-201ENST00000418195 715 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 FDPSP6-201ENST00000425091 512 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 BX119917.1-201ENST00000432517 502 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC012510.1-201ENST00000607946 759 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AL139123.1-201ENST00000612008 430 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AL161931.1-201ENST00000612768 246 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC098590.2-201ENST00000614787 281 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AL596275.2-203ENST00000641951 371 ntBASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CHMP4CQ96CF2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AL136298.2-201ENST00000556497 1570 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 MRPS17P1-201ENST00000596009 3130 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 NPM1P31-201ENST00000399021 764 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AL359633.1-201ENST00000421403 310 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AL354794.2-201ENST00000424795 1248 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 NAP1L4P3-201ENST00000432820 1147 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 GTF2F2P2-201ENST00000445825 721 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AC026336.1-201ENST00000466577 351 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 RPL23P10-201ENST00000468780 412 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AP000926.3-201ENST00000497201 299 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 CHCHD2P7-201ENST00000508008 452 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 RPL10P18-201ENST00000519384 309 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 MIR744-201ENST00000578242 98 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 RN7SL835P-201ENST00000579920 262 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 uc_338.21-201ENST00000622458 147 ntBASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHMP4CQ96CF2 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 SPATA31C2-201ENST00000324915 3777 ntBASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHMP4CQ96CF2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 RNA5SP35-201ENST00000391257 129 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 OR52S1P-201ENST00000427016 937 ntBASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.64□□□□□ -1.03
CHMP4CQ96CF2 AF274573.1-201ENST00000430535 494 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms