Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090241.1-201ENST00000587732 621 ntBASIC7.48□□□□□ -1.21
APOEP02649 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 AL353807.4-201ENST00000604995 257 ntBASIC7.48□□□□□ -1.21
APOEP02649 AL355333.1-201ENST00000605632 279 ntBASIC7.48□□□□□ -1.21
APOEP02649 AL161931.1-201ENST00000612768 246 ntBASIC7.48□□□□□ -1.21
APOEP02649 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 AC103564.3-201ENST00000621194 220 ntBASIC7.48□□□□□ -1.21
APOEP02649 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
APOEP02649 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
APOEP02649 KARSP2-201ENST00000415696 1639 ntBASIC7.48□□□□□ -1.21
APOEP02649 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.48□□□□□ -1.21
APOEP02649 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
APOEP02649 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.47□□□□□ -1.21
APOEP02649 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 MRPS17P1-201ENST00000596009 3130 ntBASIC7.47□□□□□ -1.21
APOEP02649 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
APOEP02649 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
APOEP02649 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.47□□□□□ -1.21
APOEP02649 RPL29P7-201ENST00000440227 457 ntBASIC7.47□□□□□ -1.21
APOEP02649 DEFA11P-201ENST00000446470 261 ntBASIC7.47□□□□□ -1.21
APOEP02649 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 NUCKS1P1-201ENST00000452067 703 ntBASIC7.47□□□□□ -1.21
APOEP02649 PABPC1P10-201ENST00000464731 381 ntBASIC7.47□□□□□ -1.21
APOEP02649 RN7SL705P-201ENST00000481678 294 ntBASIC7.47□□□□□ -1.21
APOEP02649 NACAP6-201ENST00000509572 622 ntBASIC7.47□□□□□ -1.21
APOEP02649 PGAM4P2-201ENST00000512491 721 ntBASIC7.47□□□□□ -1.21
APOEP02649 RNA5SP75-201ENST00000516841 111 ntBASIC7.47□□□□□ -1.21
APOEP02649 AC120036.3-201ENST00000517826 292 ntBASIC7.47□□□□□ -1.21
APOEP02649 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.47□□□□□ -1.21
APOEP02649 AC090971.3-201ENST00000557871 1041 ntBASIC7.47□□□□□ -1.21
APOEP02649 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 EEF1B2P1-201ENST00000567221 672 ntBASIC7.47□□□□□ -1.21
APOEP02649 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.47□□□□□ -1.21
APOEP02649 AC024085.1-201ENST00000604299 432 ntBASIC7.47□□□□□ -1.21
APOEP02649 AC023206.1-201ENST00000605824 298 ntBASIC7.47□□□□□ -1.21
APOEP02649 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 AC016542.3-201ENST00000623520 619 ntBASIC7.47□□□□□ -1.21
APOEP02649 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.47□□□□□ -1.21
APOEP02649 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.47□□□□□ -1.21
APOEP02649 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
APOEP02649 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
APOEP02649 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
APOEP02649 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.46□□□□□ -1.21
APOEP02649 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
APOEP02649 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.46□□□□□ -1.21
APOEP02649 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.46□□□□□ -1.21
APOEP02649 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
APOEP02649 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.46□□□□□ -1.22
APOEP02649 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.46□□□□□ -1.22
APOEP02649 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
APOEP02649 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.46□□□□□ -1.22
APOEP02649 RN7SKP85-201ENST00000411349 318 ntBASIC7.46□□□□□ -1.22
APOEP02649 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 EIF4A1P13-201ENST00000415667 230 ntBASIC7.46□□□□□ -1.22
APOEP02649 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.46□□□□□ -1.22
APOEP02649 UQCRHP1-204ENST00000424609 274 ntBASIC7.46□□□□□ -1.22
APOEP02649 AL138479.1-201ENST00000426913 484 ntBASIC7.46□□□□□ -1.22
APOEP02649 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 AC087499.3-202ENST00000441215 1173 ntBASIC7.46□□□□□ -1.22
APOEP02649 DBIL5P2-201ENST00000443827 253 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms