Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC061975.3-201ENST00000583209 244 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AL136139.1-201ENST00000605568 222 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC004839.1-201ENST00000610269 501 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC125232.1-201ENST00000452554 1408 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC133552.3-201ENST00000572236 1869 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC007993.1-201ENST00000621298 2430 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 RNU2-5P-201ENST00000410533 180 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC019080.2-201ENST00000453859 394 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 RN7SL145P-201ENST00000469955 296 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 RN7SL259P-201ENST00000478499 253 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 RPL5P11-201ENST00000498068 893 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 TRIM36-IT1-201ENST00000503723 881 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC026616.1-201ENST00000523157 525 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AP003084.1-201ENST00000524828 742 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 OR4A21P-201ENST00000532759 944 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC023827.2-201ENST00000566880 1061 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC063962.1-201ENST00000608199 521 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC068234.2-201ENST00000619646 522 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC100810.3-201ENST00000633189 2240 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 AC009948.3-201ENST00000603415 1798 ntBASIC7□□□□□ -1.29
ZNF549Q6P9A3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ZNF549Q6P9A3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7□□□□□ -1.29
ZNF549Q6P9A3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 AC104837.1-201ENST00000444644 1587 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 MAPK10-365ENST00000641902 3825 ntBASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
ZNF549Q6P9A3 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms