Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.08■□□□□ 0.81
Clip2Q9Z0H8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
Clip2Q9Z0H8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip2Q9Z0H8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Gm16061-201ENSMUST00000122167 857 ntBASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip2Q9Z0H8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip2Q9Z0H8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Gm7370-201ENSMUST00000219471 767 ntBASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip2Q9Z0H8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.03■□□□□ 0.8
Clip2Q9Z0H8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Gm13474-201ENSMUST00000122466 815 ntBASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Gm18032-201ENSMUST00000222541 538 ntBASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms