Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Gm7514-201ENSMUST00000209475 934 ntBASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tsen54Q8C2A2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tsen54Q8C2A2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tsen54Q8C2A2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tsen54Q8C2A2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Gm13534-201ENSMUST00000121169 513 ntBASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tsen54Q8C2A2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tsen54Q8C2A2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms