Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim35Q8C006 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim35Q8C006 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim35Q8C006 Gm37856-201ENSMUST00000191634 999 ntBASIC17.85■□□□□ 0.45
Trim35Q8C006 Gm44549-201ENSMUST00000208351 577 ntBASIC17.85■□□□□ 0.45
Trim35Q8C006 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim35Q8C006 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim35Q8C006 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim35Q8C006 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim35Q8C006 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.84■□□□□ 0.45
Trim35Q8C006 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim35Q8C006 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim35Q8C006 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim35Q8C006 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Trim35Q8C006 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim35Q8C006 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim35Q8C006 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim35Q8C006 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim35Q8C006 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim35Q8C006 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim35Q8C006 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Gm37215-201ENSMUST00000194927 1259 ntBASIC17.83■□□□□ 0.44
Trim35Q8C006 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim35Q8C006 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim35Q8C006 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.82■□□□□ 0.44
Trim35Q8C006 Gm42736-201ENSMUST00000200723 1353 ntBASIC17.82■□□□□ 0.44
Trim35Q8C006 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim35Q8C006 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim35Q8C006 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim35Q8C006 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim35Q8C006 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim35Q8C006 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim35Q8C006 Gm8520-201ENSMUST00000186517 868 ntBASIC17.81■□□□□ 0.44
Trim35Q8C006 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim35Q8C006 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim35Q8C006 AC158981.3-201ENSMUST00000226844 1024 ntBASIC17.81■□□□□ 0.44
Trim35Q8C006 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.81■□□□□ 0.44
Trim35Q8C006 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms