Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf18Q8BM39 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Idnk-204ENSMUST00000226010 1898 ntBASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf18Q8BM39 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf18Q8BM39 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.43■□□□□ 0.22
Prpf18Q8BM39 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf18Q8BM39 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf18Q8BM39 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Gm10849-201ENSMUST00000100397 618 ntBASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf18Q8BM39 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms