Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Gm43060-201ENSMUST00000200621 289 ntBASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn3bQ8BHK2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn3bQ8BHK2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Gm6139-201ENSMUST00000079261 882 ntBASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Reep4-203ENSMUST00000226563 1444 ntBASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn3bQ8BHK2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn3bQ8BHK2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Gm12821-201ENSMUST00000120022 600 ntBASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.08■□□□□ 0.16
Scn3bQ8BHK2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Gm21956-201ENSMUST00000179946 522 ntBASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Gm29791-202ENSMUST00000207888 369 ntBASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn3bQ8BHK2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms