Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Otub1Q7TQI3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.44■□□□□ 0.22
Otub1Q7TQI3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Otub1Q7TQI3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Gm11249-201ENSMUST00000117071 859 ntBASIC16.42■□□□□ 0.22
Otub1Q7TQI3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Dio3-201ENSMUST00000097228 1449 ntBASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Otub1Q7TQI3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Otub1Q7TQI3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Mir2861-201ENSMUST00000175539 82 ntBASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Otub1Q7TQI3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Otub1Q7TQI3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Otub1Q7TQI3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Otub1Q7TQI3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Otub1Q7TQI3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms