Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Traf4Q61382 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Traf4Q61382 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.29■□□□□ 0.04
Traf4Q61382 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Traf4Q61382 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Traf4Q61382 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Traf4Q61382 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Traf4Q61382 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.28■□□□□ 0.04
Traf4Q61382 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.28■□□□□ 0.04
Traf4Q61382 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Traf4Q61382 Gm15375-201ENSMUST00000119510 849 ntBASIC15.28■□□□□ 0.04
Traf4Q61382 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.28■□□□□ 0.04
Traf4Q61382 Gm43183-201ENSMUST00000200632 547 ntBASIC15.28■□□□□ 0.04
Traf4Q61382 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Traf4Q61382 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.28■□□□□ 0.04
Traf4Q61382 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Traf4Q61382 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.28■□□□□ 0.04
Traf4Q61382 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Traf4Q61382 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Traf4Q61382 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Traf4Q61382 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Traf4Q61382 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Traf4Q61382 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.27■□□□□ 0.04
Traf4Q61382 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Traf4Q61382 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Traf4Q61382 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Traf4Q61382 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.27■□□□□ 0.04
Traf4Q61382 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Traf4Q61382 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.27■□□□□ 0.03
Traf4Q61382 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Traf4Q61382 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Traf4Q61382 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.26■□□□□ 0.03
Traf4Q61382 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.26■□□□□ 0.03
Traf4Q61382 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.26■□□□□ 0.03
Traf4Q61382 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.26■□□□□ 0.03
Traf4Q61382 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.26■□□□□ 0.03
Traf4Q61382 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.26■□□□□ 0.03
Traf4Q61382 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Gm18025-201ENSMUST00000221733 862 ntBASIC15.26■□□□□ 0.03
Traf4Q61382 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Traf4Q61382 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms