Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pabpn1lQ5XFR0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pabpn1lQ5XFR0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Gm5874-201ENSMUST00000096101 508 ntBASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pabpn1lQ5XFR0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pabpn1lQ5XFR0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pabpn1lQ5XFR0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pabpn1lQ5XFR0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Gm43060-201ENSMUST00000200621 289 ntBASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pabpn1lQ5XFR0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms