Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav7d-3Q5R1I1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-3Q5R1I1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-3Q5R1I1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Gm13148-201ENSMUST00000118892 745 ntBASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-3Q5R1I1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-3Q5R1I1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav7d-3Q5R1I1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms