Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1brtQ3UNC9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1brtQ3UNC9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1brtQ3UNC9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms