Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.16■□□□□ 0.34
Krt6aP50446 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.16■□□□□ 0.34
Krt6aP50446 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Mir5133-201ENSMUST00000174955 77 ntBASIC17.16■□□□□ 0.34
Krt6aP50446 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Krt6aP50446 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Krt6aP50446 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Krt6aP50446 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Krt6aP50446 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Krt6aP50446 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.15■□□□□ 0.34
Krt6aP50446 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Krt6aP50446 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Krt6aP50446 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Krt6aP50446 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.14■□□□□ 0.34
Krt6aP50446 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.14■□□□□ 0.33
Krt6aP50446 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.14■□□□□ 0.33
Krt6aP50446 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Mtag2-201ENSMUST00000058665 714 ntBASIC17.14■□□□□ 0.33
Krt6aP50446 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Krt6aP50446 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Krt6aP50446 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Krt6aP50446 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Krt6aP50446 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Krt6aP50446 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Krt6aP50446 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
Krt6aP50446 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Krt6aP50446 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Krt6aP50446 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Krt6aP50446 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Krt6aP50446 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Krt6aP50446 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.13■□□□□ 0.33
Krt6aP50446 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.13■□□□□ 0.33
Krt6aP50446 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Krt6aP50446 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Gm11643-201ENSMUST00000119578 864 ntBASIC17.12■□□□□ 0.33
Krt6aP50446 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Krt6aP50446 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt6aP50446 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Krt6aP50446 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Krt6aP50446 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Mir6349-201ENSMUST00000184059 97 ntBASIC17.11■□□□□ 0.33
Krt6aP50446 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt6aP50446 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.11■□□□□ 0.33
Krt6aP50446 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt6aP50446 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms