Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.02■□□□□ 0.8
Pde6aP27664 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.02■□□□□ 0.8
Pde6aP27664 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.02■□□□□ 0.8
Pde6aP27664 Gm27463-201ENSMUST00000183569 57 ntBASIC20.02■□□□□ 0.8
Pde6aP27664 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Pde6aP27664 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.01■□□□□ 0.79
Pde6aP27664 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.01■□□□□ 0.79
Pde6aP27664 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.01■□□□□ 0.79
Pde6aP27664 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.01■□□□□ 0.79
Pde6aP27664 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.01■□□□□ 0.79
Pde6aP27664 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pde6aP27664 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6aP27664 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pde6aP27664 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20■□□□□ 0.79
Pde6aP27664 Gm13559-201ENSMUST00000120476 863 ntBASIC20■□□□□ 0.79
Pde6aP27664 Gm43799-201ENSMUST00000201845 579 ntBASIC20■□□□□ 0.79
Pde6aP27664 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pde6aP27664 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6aP27664 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20■□□□□ 0.79
Pde6aP27664 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.99■□□□□ 0.79
Pde6aP27664 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.99■□□□□ 0.79
Pde6aP27664 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pde6aP27664 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pde6aP27664 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Pde6aP27664 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pde6aP27664 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6aP27664 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.98■□□□□ 0.79
Pde6aP27664 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pde6aP27664 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.98■□□□□ 0.79
Pde6aP27664 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pde6aP27664 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.98■□□□□ 0.79
Pde6aP27664 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6aP27664 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Pde6aP27664 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pde6aP27664 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Pde6aP27664 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.97■□□□□ 0.79
Pde6aP27664 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.97■□□□□ 0.79
Pde6aP27664 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.97■□□□□ 0.79
Pde6aP27664 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pde6aP27664 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pde6aP27664 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6aP27664 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pde6aP27664 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pde6aP27664 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pde6aP27664 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms