Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdx1P18111 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.93□□□□□ -0.18
Cdx1P18111 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdx1P18111 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cdx1P18111 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.92□□□□□ -0.18
Cdx1P18111 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdx1P18111 AA386476-201ENSMUST00000098781 1665 ntBASIC13.92□□□□□ -0.18
Cdx1P18111 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdx1P18111 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cdx1P18111 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdx1P18111 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.92□□□□□ -0.18
Cdx1P18111 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cdx1P18111 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cdx1P18111 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cdx1P18111 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdx1P18111 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdx1P18111 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Gm7290-201ENSMUST00000104990 617 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Gm13146-201ENSMUST00000118508 780 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Gm12918-201ENSMUST00000120234 636 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Gm15710-201ENSMUST00000121821 636 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Gm5075-201ENSMUST00000196916 622 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.91□□□□□ -0.18
Cdx1P18111 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdx1P18111 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Cdx1P18111 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cdx1P18111 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdx1P18111 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx1P18111 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdx1P18111 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdx1P18111 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.9□□□□□ -0.18
Cdx1P18111 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdx1P18111 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdx1P18111 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx1P18111 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdx1P18111 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cdx1P18111 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Cdx1P18111 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx1P18111 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdx1P18111 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx1P18111 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms