Protein–RNA interactions for Protein: P17883

SKI3, Superkiller protein 3, yeastyeast

Known RBP Predictions only

Length 1,432 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI3P17883 CDC65tQ(CUG)M 72 nt-2.99□□□□□ -2.89
SKI3P17883 YOR293C-AYOR293C-A 150 nt-3.02□□□□□ -2.89
SKI3P17883 JLP2YMR132C 627 nt-3.02□□□□□ -2.89
SKI3P17883 YGR025WYGR025W 303 nt-3.03□□□□□ -2.89
SKI3P17883 YAR029WYAR029W 225 nt-3.03□□□□□ -2.89
SKI3P17883 YFR009W-AYFR009W-A 258 nt-3.04□□□□□ -2.9
SKI3P17883 YHR007C-AYHR007C-A 216 nt-3.04□□□□□ -2.9
SKI3P17883 snR81snR81 201 nt-3.05□□□□□ -2.9
SKI3P17883 YKL083WYKL083W 615 nt-3.09□□□□□ -2.9
SKI3P17883 YPL229WYPL229W 621 nt-3.09□□□□□ -2.9
SKI3P17883 YJR087WYJR087W 351 nt-3.1□□□□□ -2.91
SKI3P17883 YLR217WYLR217W 324 nt-3.1□□□□□ -2.91
SKI3P17883 YDL011CYDL011C 324 nt-3.11□□□□□ -2.91
SKI3P17883 YKL063CYKL063C 504 nt-3.16□□□□□ -2.92
SKI3P17883 YEL020C-BYEL020C-B 198 nt-3.19□□□□□ -2.92
SKI3P17883 YGR240C-AYGR240C-A 201 nt-3.19□□□□□ -2.92
SKI3P17883 YIR021W-AYIR021W-A 213 nt-3.19□□□□□ -2.92
SKI3P17883 YDR426CYDR426C 378 nt-3.2□□□□□ -2.92
SKI3P17883 YBR285WYBR285W 435 nt-3.2□□□□□ -2.92
SKI3P17883 snR34snR34 203 nt-3.21□□□□□ -2.92
SKI3P17883 snR39BsnR39B 96 nt-3.21□□□□□ -2.92
SKI3P17883 CSE2YNR010W 450 nt-3.23□□□□□ -2.93
SKI3P17883 TSC3YBR058C-A 243 nt-3.23□□□□□ -2.93
SKI3P17883 snR77snR77 88 nt-3.24□□□□□ -2.93
SKI3P17883 YOR121CYOR121C 306 nt-3.24□□□□□ -2.93
SKI3P17883 YKL044WYKL044W 321 nt-3.26□□□□□ -2.93
SKI3P17883 YER175W-AYER175W-A 165 nt-3.27□□□□□ -2.93
SKI3P17883 tQ(UUG)QtQ(UUG)Q 76 nt-3.27□□□□□ -2.93
SKI3P17883 YLR456WYLR456W 615 nt-3.27□□□□□ -2.93
SKI3P17883 snR9snR9 187 nt-3.28□□□□□ -2.94
SKI3P17883 YMR315W-AYMR315W-A 108 nt-3.31□□□□□ -2.94
SKI3P17883 YNL205CYNL205C 423 nt-3.31□□□□□ -2.94
SKI3P17883 YAF9YNL107W 681 nt-3.36□□□□□ -2.95
SKI3P17883 BI2Q0110 1272 nt-3.37□□□□□ -2.95
SKI3P17883 RPS27BYHR021C 249 nt-3.37□□□□□ -2.95
SKI3P17883 YFL012WYFL012W 447 nt-3.38□□□□□ -2.95
SKI3P17883 YBL071CYBL071C 309 nt-3.38□□□□□ -2.95
SKI3P17883 YER090C-AYER090C-A 90 nt-3.39□□□□□ -2.95
SKI3P17883 YMR193C-AYMR193C-A 387 nt-3.4□□□□□ -2.95
SKI3P17883 PCC1YKR095W-A 267 nt-3.43□□□□□ -2.96
SKI3P17883 YDL016CYDL016C 303 nt-3.44□□□□□ -2.96
SKI3P17883 YNL266WYNL266W 420 nt-3.44□□□□□ -2.96
SKI3P17883 YML054C-AYML054C-A 159 nt-3.49□□□□□ -2.97
SKI3P17883 YLR202CYLR202C 327 nt-3.51□□□□□ -2.97
SKI3P17883 PRM3YPL192C 402 nt-3.52□□□□□ -2.97
SKI3P17883 ATP19YOL077W-A 207 nt-3.53□□□□□ -2.97
SKI3P17883 YIL029CYIL029C 429 nt-3.53□□□□□ -2.98
SKI3P17883 snR50snR50 90 nt-3.53□□□□□ -2.98
SKI3P17883 YDR048CYDR048C 315 nt-3.55□□□□□ -2.98
SKI3P17883 YGR174W-AYGR174W-A 87 nt-3.55□□□□□ -2.98
SKI3P17883 YDR544CYDR544C 429 nt-3.57□□□□□ -2.98
SKI3P17883 YOR309CYOR309C 381 nt-3.57□□□□□ -2.98
SKI3P17883 GPI15YNL038W 690 nt-3.58□□□□□ -2.98
SKI3P17883 TOM22YNL131W 459 nt-3.6□□□□□ -2.99
SKI3P17883 YJR162CYJR162C 351 nt-3.63□□□□□ -2.99
SKI3P17883 YNL337WYNL337W 255 nt-3.63□□□□□ -2.99
SKI3P17883 YGR069WYGR069W 336 nt-3.68□□□□□ -3
SKI3P17883 YMR172C-AYMR172C-A 384 nt-3.71□□□□□ -3
SKI3P17883 YOL083C-AYOL083C-A 141 nt-3.73□□□□□ -3.01
SKI3P17883 snR67snR67 82 nt-3.74□□□□□ -3.01
SKI3P17883 snR69snR69 101 nt-3.76□□□□□ -3.01
SKI3P17883 YOR314W-AYOR314W-A 111 nt-3.81□□□□□ -3.02
SKI3P17883 YAR047CYAR047C 321 nt-3.82□□□□□ -3.02
SKI3P17883 YML099W-AYML099W-A 330 nt-3.82□□□□□ -3.02
SKI3P17883 YLR269CYLR269C 351 nt-3.87□□□□□ -3.03
SKI3P17883 YLL019W-AYLL019W-A 93 nt-3.89□□□□□ -3.03
SKI3P17883 YOR008C-AYOR008C-A 225 nt-3.91□□□□□ -3.04
SKI3P17883 YJL197C-AYJL197C-A 282 nt-3.93□□□□□ -3.04
SKI3P17883 YDR102CYDR102C 333 nt-3.94□□□□□ -3.04
SKI3P17883 YDR524W-CYDR524W-C 90 nt-3.98□□□□□ -3.05
SKI3P17883 HMRA1YCR097W 381 nt-3.99□□□□□ -3.05
SKI3P17883 YGL149WYGL149W 306 nt-4.04□□□□□ -3.06
SKI3P17883 YER137W-AYER137W-A 306 nt-4.12□□□□□ -3.07
SKI3P17883 YIL115W-AYIL115W-A 372 nt-4.14□□□□□ -3.07
SKI3P17883 YBR182C-AYBR182C-A 195 nt-4.15□□□□□ -3.07
SKI3P17883 YLR342W-AYLR342W-A 174 nt-4.21□□□□□ -3.08
SKI3P17883 YDL158CYDL158C 309 nt-4.24□□□□□ -3.09
SKI3P17883 CSN9YDR179C 489 nt-4.26□□□□□ -3.09
SKI3P17883 YLR412C-AYLR412C-A 207 nt-4.26□□□□□ -3.09
SKI3P17883 YOR072W-BYOR072W-B 162 nt-4.29□□□□□ -3.1
SKI3P17883 YLR286W-AYLR286W-A 135 nt-4.3□□□□□ -3.1
SKI3P17883 YOR376W-AYOR376W-A 156 nt-4.3□□□□□ -3.1
SKI3P17883 YER097WYER097W 330 nt-4.34□□□□□ -3.1
SKI3P17883 tD(GUC)QtD(GUC)Q 75 nt-4.37□□□□□ -3.11
SKI3P17883 MPC1YGL080W 393 nt-4.47□□□□□ -3.13
SKI3P17883 YGR146C-AYGR146C-A 162 nt-4.48□□□□□ -3.13
SKI3P17883 YDL159C-BYDL159C-B 177 nt-4.49□□□□□ -3.13
SKI3P17883 YBR196C-AYBR196C-A 150 nt-4.56□□□□□ -3.14
SKI3P17883 tM(CAU)Q2tM(CAU)Q2 78 nt-4.58□□□□□ -3.14
SKI3P17883 YOR316C-AYOR316C-A 210 nt-4.59□□□□□ -3.14
SKI3P17883 snR54snR54 86 nt-4.59□□□□□ -3.14
SKI3P17883 YFL032WYFL032W 321 nt-4.62□□□□□ -3.15
SKI3P17883 YDR524C-AYDR524C-A 120 nt-4.65□□□□□ -3.15
SKI3P17883 YBR178WYBR178W 375 nt-4.65□□□□□ -3.15
SKI3P17883 YFL019CYFL019C 354 nt-4.68□□□□□ -3.16
SKI3P17883 STE18YJR086W 333 nt-4.69□□□□□ -3.16
SKI3P17883 YPR197CYPR197C 564 nt-4.69□□□□□ -3.16
SKI3P17883 YER181CYER181C 324 nt-4.71□□□□□ -3.16
SKI3P17883 snR55snR55 98 nt-4.73□□□□□ -3.17
SKI3P17883 YLR406C-AYLR406C-A 150 nt-4.73□□□□□ -3.17
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms