Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Hcn1O88704 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hcn1O88704 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Hcn1O88704 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hcn1O88704 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.52■□□□□ 0.24
Hcn1O88704 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hcn1O88704 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.52■□□□□ 0.23
Hcn1O88704 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hcn1O88704 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hcn1O88704 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hcn1O88704 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hcn1O88704 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.51■□□□□ 0.23
Hcn1O88704 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.51■□□□□ 0.23
Hcn1O88704 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.51■□□□□ 0.23
Hcn1O88704 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.51■□□□□ 0.23
Hcn1O88704 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hcn1O88704 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hcn1O88704 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Gm15375-201ENSMUST00000119510 849 ntBASIC16.5■□□□□ 0.23
Hcn1O88704 Gm15378-201ENSMUST00000121894 207 ntBASIC16.5■□□□□ 0.23
Hcn1O88704 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.5■□□□□ 0.23
Hcn1O88704 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hcn1O88704 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Tgds-204ENSMUST00000228543 1594 ntBASIC16.49■□□□□ 0.23
Hcn1O88704 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hcn1O88704 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hcn1O88704 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hcn1O88704 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Hcn1O88704 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.48■□□□□ 0.23
Hcn1O88704 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hcn1O88704 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.48■□□□□ 0.23
Hcn1O88704 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hcn1O88704 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms