Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnu1O54982 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Kcnu1O54982 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnu1O54982 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnu1O54982 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcnu1O54982 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.38■□□□□ 0.53
Kcnu1O54982 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcnu1O54982 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.37■□□□□ 0.53
Kcnu1O54982 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Kcnu1O54982 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.37■□□□□ 0.53
Kcnu1O54982 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcnu1O54982 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.36■□□□□ 0.53
Kcnu1O54982 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kcnu1O54982 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.35■□□□□ 0.53
Kcnu1O54982 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.35■□□□□ 0.53
Kcnu1O54982 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kcnu1O54982 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Kcnu1O54982 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.34■□□□□ 0.53
Kcnu1O54982 Gm24841-201ENSMUST00000158676 357 ntBASIC18.34■□□□□ 0.53
Kcnu1O54982 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.34■□□□□ 0.53
Kcnu1O54982 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.34■□□□□ 0.53
Kcnu1O54982 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.34■□□□□ 0.53
Kcnu1O54982 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Kcnu1O54982 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Kcnu1O54982 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Kcnu1O54982 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Kcnu1O54982 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Kcnu1O54982 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Kcnu1O54982 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Kcnu1O54982 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.33■□□□□ 0.52
Kcnu1O54982 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.33■□□□□ 0.52
Kcnu1O54982 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kcnu1O54982 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Kcnu1O54982 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kcnu1O54982 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kcnu1O54982 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms