Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.36■□□□□ 0.05
Sh2b3O09039 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.36■□□□□ 0.05
Sh2b3O09039 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh2b3O09039 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.35■□□□□ 0.05
Sh2b3O09039 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sh2b3O09039 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.35■□□□□ 0.05
Sh2b3O09039 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sh2b3O09039 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.34■□□□□ 0.05
Sh2b3O09039 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh2b3O09039 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sh2b3O09039 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Sh2b3O09039 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh2b3O09039 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
Sh2b3O09039 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Gm7889-201ENSMUST00000185591 958 ntBASIC15.33■□□□□ 0.04
Sh2b3O09039 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.33■□□□□ 0.04
Sh2b3O09039 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2b3O09039 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.33■□□□□ 0.04
Sh2b3O09039 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Sh2b3O09039 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.32■□□□□ 0.04
Sh2b3O09039 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.32■□□□□ 0.04
Sh2b3O09039 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.32■□□□□ 0.04
Sh2b3O09039 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms