Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Gm715-201ENSMUST00000117865 831 ntBASIC16.43■□□□□ 0.22
Sh3yl1O08641 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3yl1O08641 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.42■□□□□ 0.22
Sh3yl1O08641 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Mir6982-201ENSMUST00000184354 68 ntBASIC16.42■□□□□ 0.22
Sh3yl1O08641 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3yl1O08641 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3yl1O08641 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.4■□□□□ 0.22
Sh3yl1O08641 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.4■□□□□ 0.22
Sh3yl1O08641 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3yl1O08641 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3yl1O08641 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3yl1O08641 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3yl1O08641 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sh3yl1O08641 Haglr-201ENSMUST00000100000 2085 ntBASIC16.39■□□□□ 0.21
Sh3yl1O08641 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3yl1O08641 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms