Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AL033527.3-201ENST00000566366 1196 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AC053503.5-201ENST00000601508 636 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AC012354.3-201ENST00000623734 483 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 LTB4R2-202ENST00000528054 3092 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 LINC01465-201ENST00000408887 1940 ntBASIC14.19□□□□□ -0.14
LINC01549A6NIU2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.19□□□□□ -0.14
LINC01549A6NIU2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 TSPY9P-201ENST00000440215 945 ntBASIC14.19□□□□□ -0.14
LINC01549A6NIU2 TSPY11P-201ENST00000442607 1045 ntBASIC14.19□□□□□ -0.14
LINC01549A6NIU2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01549A6NIU2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 BX119927.1-201ENST00000636596 1552 ntBASIC14.18□□□□□ -0.14
LINC01549A6NIU2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 POU5F1P4-201ENST00000413175 1085 ntBASIC14.18□□□□□ -0.14
LINC01549A6NIU2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 AC136469.2-201ENST00000623944 1028 ntBASIC14.18□□□□□ -0.14
LINC01549A6NIU2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01549A6NIU2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms