Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm11421-201ENSMUST00000122124 294 ntBASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-2A0A0G2JF93 Idnk-204ENSMUST00000226010 1898 ntBASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.46□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Trav13n-2A0A0G2JF93 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Gm27801-201ENSMUST00000184174 223 ntBASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13n-2A0A0G2JF93 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms