Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm10418-201ENSMUST00000100943 576 ntBASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cap2-205ENSMUST00000225824 1634 ntBASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms