Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm10138-203ENSMUST00000206952 366 ntBASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Mir6349-201ENSMUST00000184059 97 ntBASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Mtag2-201ENSMUST00000058665 714 ntBASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-47A0A0A6YY41 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm11249-201ENSMUST00000117071 859 ntBASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm20049-201ENSMUST00000219950 730 ntBASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-47A0A0A6YY41 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm29791-202ENSMUST00000207888 369 ntBASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-47A0A0A6YY41 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm13158-201ENSMUST00000122007 736 ntBASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Mir2861-201ENSMUST00000175539 82 ntBASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv1-47A0A0A6YY41 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-47A0A0A6YY41 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-47A0A0A6YY41 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ighv1-47A0A0A6YY41 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-47A0A0A6YY41 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms