Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav4n-4A0A075B615 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav4n-4A0A075B615 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav4n-4A0A075B615 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Gm11620-201ENSMUST00000118770 1845 ntBASIC12□□□□□ -0.49
Trav4n-4A0A075B615 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms